STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72452.1Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (404 aa)    
Predicted Functional Partners:
ABK72747.1
Branched-chain amino acid ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01094.
 
 
 0.999
ABK72908.1
ABC transporter branched chain amino acid transport permease; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
ABK75258.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.999
ABK72587.1
Branched-chain amino acid ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.999
ABK71843.1
Branched-chain amino acid transport system ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.991
ABK72013.1
Hydrophobic amino acid ABC transporter, putative; Identified by match to protein family HMM PF01094.
 
 
 0.991
ABK76056.1
ABC-type transport system ATP-binding protein II; Identified by match to protein family HMM PF00005.
 
 0.989
ABK69925.1
Branched chain amino acid transport ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.986
ABK71360.1
ABC-type transport system periplasmic substrate-binding protein; Identified by match to protein family HMM PF01094.
 
 
 0.984
ABK75444.1
ABC-type transport system ATP-binding protein I; Identified by match to protein family HMM PF00005.
 
 0.984
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.