Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK75350.1Hemerythrin HHE cation binding domain subfamily protein, putative; Identified by match to protein family HMM PF01814. (185 aa)    
Predicted Functional Partners:
ABK74024.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106.
 
  
 0.885
ABK73463.1
Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266.
 
  
 0.873
ABK70655.1
Acyl carrier protein.
  
    0.584
moxR-2
Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
   
  
 0.550
ABK74299.1
Identified by match to protein family HMM PF00578.
      
 0.545
ABK72973.1
Hemerythrin HHE cation binding region; Identified by match to protein family HMM PF01814.
  
  
0.480
ABK72150.1
Hemerythrin HHE cation binding domain subfamily protein, putative.
  
  
0.435
ABK70567.1
Conserved hypothetical protein.
 
    0.407
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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