Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Score
ABK69791.1Trap dicarboxylate transporter, dctq subunit, putative. (172 aa)    
Predicted Functional Partners:
ABK76035.1
TRAP transporter, DctM-like membrane protein; Identified by match to protein family HMM PF06808.
 
 
  0.993
ABK73613.1
Bacterial extracellular solute-binding protein, family protein 7; Identified by match to protein family HMM PF03480.
 
  
 0.948
ABK70731.1
Putative hydroxyacid aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
     0.835
ABK75065.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF00795.
  
    0.777
ABK70357.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.714
ABK69769.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
       0.550
ABK75659.1
Putative C4 decarboxylate transport protein; Identified by match to protein family HMM PF04290.
 
 
  0.513
ABK70184.1
Trap dicarboxylate transporter, dctm subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786.
 
 
  0.476
aroK
Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313.
    
  0.432
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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