Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK76035.1TRAP transporter, DctM-like membrane protein; Identified by match to protein family HMM PF06808. (453 aa)    
Predicted Functional Partners:
ABK69791.1
Trap dicarboxylate transporter, dctq subunit, putative.
 
 
  0.993
ABK73613.1
Bacterial extracellular solute-binding protein, family protein 7; Identified by match to protein family HMM PF03480.
 
 
 0.974
ABK75659.1
Putative C4 decarboxylate transport protein; Identified by match to protein family HMM PF04290.
 
 0.967
ABK72849.1
Trap-t family protein transporter, dctp; Identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787; match to protein family HMM TIGR01409.
 
 
 0.917
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 
 0.874
ABK70731.1
Putative hydroxyacid aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
     0.832
ABK75065.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF00795.
  
    0.792
ABK76139.1
Pyruvate synthase; Identified by match to protein family HMM PF01855.
    
 0.744
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.733
ABK70357.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.714
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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