Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK71671.1Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. (337 aa)    
Predicted Functional Partners:
ABK72624.1
Isonitrile hydratase, putative; Identified by match to protein family HMM PF01965.
 
   
0.759
ABK74189.1
Regulatory protein, TetR; Identified by match to protein family HMM PF00440.
 
    0.667
ABK75689.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
   
    0.607
ABK73067.1
Putative transcriptional regulator; Identified by match to protein family HMM PF01638.
   
    0.607
ABK72129.1
Identified by match to protein family HMM PF00903.
 
    0.595
ABK74597.1
Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
   
    0.590
ABK75039.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
   
  
 0.586
ABK75155.1
Transcriptional regulator; Identified by match to protein family HMM PF00165.
 
 
 0.585
ABK75376.1
Identified by match to protein family HMM PF01810.
  
    0.581
ABK76117.1
Probable transcriptional regulator, AraC family protein, putative; Identified by match to protein family HMM PF00165.
 
 
 0.579
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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