Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK72085.1TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. (204 aa)    
Predicted Functional Partners:
ABK74474.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.787
kstR2
Transcriptional regulator, TetR family protein; Controls the expression of a small regulon that may play a role in the utilization of cholesterol.
  
    0.638
ABK74956.1
Transcriptional regulator, TetR family protein, putative; Identified by match to protein family HMM PF00440.
  
    0.604
ABK71358.1
Metal dependent hydrolase; Identified by match to protein family HMM PF00753.
       0.469
ABK70676.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
  
 0.457
ABK71374.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.454
ABK74448.1
Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
   
 
 0.442
ABK74909.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
  
 0.426
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
  
 0.407
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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