Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK71651.1Conserved hypothetical protein. (278 aa)    
Predicted Functional Partners:
ABK69556.1
DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992.
  
    0.590
ABK74316.1
Conserved hypothetical protein.
  
  
  0.585
ABK70738.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00440.
  
     0.552
ABK72333.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.529
ABK70404.1
Acyltransferase, ws/dgat/mgat subfamily protein; Identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; Belongs to the long-chain O-acyltransferase family.
  
  
  0.527
ABK75617.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06738.
       0.523
katA
Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199.
  
 0.519
ABK74752.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
 0.519
katA-2
Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199.
  
 0.519
ABK70268.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
 
 0.511
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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