Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ABK75538.1TetR family protein transcriptional regulator; Identified by match to protein family HMM PF00440. (195 aa)    
Predicted Functional Partners:
ABK74611.1
NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
 
     0.861
ABK70588.1
Conserved hypothetical protein.
       0.773
ABK70408.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.662
ABK71374.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.626
ABK74848.1
Identified by match to protein family HMM PF00903.
  
     0.548
ABK75904.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.523
ABK70543.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.523
ABK69567.1
LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
 
 0.515
ABK70623.1
Transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
 
 0.505
ABK70475.1
TetR family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.500
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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