Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK72255.1Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. (323 aa)    
Predicted Functional Partners:
ABK69865.1
Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277.
 
    0.635
ABK75689.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
   
    0.607
ABK73067.1
Putative transcriptional regulator; Identified by match to protein family HMM PF01638.
   
    0.607
ABK74597.1
Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
   
    0.590
ABK75039.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
   
  
 0.586
ABK72129.1
Identified by match to protein family HMM PF00903.
 
    0.582
sir2
NAD-dependent deacetylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form.
  
    0.573
ABK74820.1
KDP operon transcriptional regulatory protein KdpE; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
   
  
 0.558
ABK75155.1
Transcriptional regulator; Identified by match to protein family HMM PF00165.
 
 
 0.556
ABK76117.1
Probable transcriptional regulator, AraC family protein, putative; Identified by match to protein family HMM PF00165.
 
 
 0.554
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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