Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK74262.1Conserved hypothetical protein, putative; Identified by match to protein family HMM PF00657. (228 aa)    
Predicted Functional Partners:
ABK71169.1
Putative membrane acyltransferase; Identified by match to protein family HMM PF01757.
 
   
 0.792
ABK74136.1
Erp protein.
 
  
 0.710
ABK74838.1
Hypothetical protein; Identified by Glimmer2; putative.
 
  
  0.696
ABK72749.1
Conserved hypothetical protein.
  
     0.684
ABK74255.1
Immunogenic protein MPT63.
  
     0.674
ABK73385.1
Conserved hypothetical protein.
 
 0.673
ABK75545.1
Conserved hypothetical protein.
 
 0.665
ABK73217.1
Conserved hypothetical protein.
  
   
 0.655
snm
Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family.
  
   
 0.640
ABK72515.1
Identified by match to protein family HMM PF00903.
 
     0.636
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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