Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
ABK74021.1Conserved hypothetical protein; Identified by match to protein family HMM PF04324. (69 aa)    
Predicted Functional Partners:
bfr
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.891
bfrB
Ferritin family protein; Iron-storage protein that displays ferroxidase activity, catalyzing the oxidation of Fe(2+) ions into Fe(3+) ions, that can then be deposited as a ferric-oxide mineral core within the central cavity of the protein complex.
      
 0.819
ABK72611.1
FadD16 protein.
  
  
 0.800
ABK71676.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
ABK72183.1
Iron-dependent peroxidase; Identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01413.
   
  
 0.475
ABK72538.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00355; match to protein family HMM PF01106.
  
 
 0.464
ABK73990.1
Conserved hypothetical protein.
  
  
 0.462
ABK70056.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.462
cobA
uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470.
  
  
 0.456
ABK74411.1
Multiphosphoryl transfer protein (MTP); Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family.
    
 0.425
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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