STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73565.1Monooxygenase; Identified by match to protein family HMM PF00296. (334 aa)    
Predicted Functional Partners:
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
 
    0.564
ABK73605.1
NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358.
 
 0.498
ABK69815.1
Identified by match to protein family HMM PF02525; match to protein family HMM PF03358.
 
 0.475
ABK72300.1
Identified by match to protein family HMM PF02525; match to protein family HMM PF03358.
 
 0.475
ABK69576.1
Nitrilotriacetate monooxygenase component A.
  
  
 0.474
ABK75020.1
NADH-fmn oxidoreductase; Identified by match to protein family HMM PF01613.
 
 
 0.451
ABK71334.1
ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein.
 
     0.419
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.