STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72288.1Ferric cations import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (350 aa)    
Predicted Functional Partners:
ABK69858.1
iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528.
 
 0.998
ABK75662.1
Ferric iron-binding periplasmic protein of ABC transporter; Identified by match to protein family HMM PF01547.
 
 
 0.995
ABK73279.1
Polyamine ABC transporter integral membrane protein; Identified by match to protein family HMM PF00528.
 
  
 0.786
ABK70698.1
Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.782
ABK74220.1
Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.767
ABK75398.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.756
ABK75864.1
ABC transporter, permease protein, putative; Identified by match to protein family HMM PF00528.
 
  
 0.739
ABK74243.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 0.735
ABK73489.1
Polyamine ABC-transporter, inner membrane subunit; Identified by match to protein family HMM PF00528.
 
  
 0.708
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.703
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.