Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70481.1Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. (286 aa)    
Predicted Functional Partners:
ABK74758.1
Conserved hypothetical protein.
       0.630
ABK71266.1
Conserved hypothetical protein.
  
    0.579
ABK74359.1
Conserved hypothetical protein.
     
 0.567
ABK75676.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01266.
     
  0.500
ABK73968.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05305.
       0.449
ABK76102.1
Nicotinamidase/pyrazinamidase; Identified by match to protein family HMM PF00857.
     
 0.449
ABK74674.1
DoxX subfamily protein, putative; Identified by match to protein family HMM PF07681.
       0.413
ABK74279.1
Conserved hypothetical protein.
       0.410
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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