ABK74602.1 protein (Mycolicibacterium smegmatis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ABK74602.1

ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. (256 aa)

Predicted Functional Partners:

ABK71801.1

0.999

ABK70221.1

0.989

ABK75138.1

0.851

ABK75304.1

0.764

ABK76237.1

0.639

ABK71026.1

0.590

ABK74109.1

0.583

ABK71626.1

0.583

ABK73366.1

0.577

ABK72999.1

0.568

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70221.1	ABK71801.1	MSMEG_3765	MSMEG_3762	Transcriptional regulator; Identified by match to protein family HMM PF00440.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.985
ABK70221.1	ABK72999.1	MSMEG_3765	MSMEG_3761	Transcriptional regulator; Identified by match to protein family HMM PF00440.	Putative Clp protease subunit; Identified by match to protein family HMM PF02861.	0.557
ABK70221.1	ABK74602.1	MSMEG_3765	MSMEG_3763	Transcriptional regulator; Identified by match to protein family HMM PF00440.	ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025.	0.989
ABK70221.1	ABK75138.1	MSMEG_3765	MSMEG_2946	Transcriptional regulator; Identified by match to protein family HMM PF00440.	Identified by match to protein family HMM PF06993.	0.824
ABK71026.1	ABK74109.1	MSMEG_6509	MSMEG_1642	ABC-type drug export system, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.	0.522
ABK71026.1	ABK74602.1	MSMEG_6509	MSMEG_3763	ABC-type drug export system, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025.	0.590
ABK71026.1	ABK76237.1	MSMEG_6509	MSMEG_5076	ABC-type drug export system, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter membrane-spanning protein.	0.814
ABK71626.1	ABK74109.1	MSMEG_6766	MSMEG_1642	ABC transporter, ATP-binding protein, NodI family protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.	0.522
ABK71626.1	ABK74602.1	MSMEG_6766	MSMEG_3763	ABC transporter, ATP-binding protein, NodI family protein; Identified by match to protein family HMM PF00005.	ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025.	0.583
ABK71626.1	ABK76237.1	MSMEG_6766	MSMEG_5076	ABC transporter, ATP-binding protein, NodI family protein; Identified by match to protein family HMM PF00005.	ABC transporter membrane-spanning protein.	0.790
ABK71801.1	ABK70221.1	MSMEG_3762	MSMEG_3765	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Transcriptional regulator; Identified by match to protein family HMM PF00440.	0.985
ABK71801.1	ABK72999.1	MSMEG_3762	MSMEG_3761	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative Clp protease subunit; Identified by match to protein family HMM PF02861.	0.931
ABK71801.1	ABK74109.1	MSMEG_3762	MSMEG_1642	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.	0.522
ABK71801.1	ABK74602.1	MSMEG_3762	MSMEG_3763	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025.	0.999
ABK71801.1	ABK75138.1	MSMEG_3762	MSMEG_2946	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Identified by match to protein family HMM PF06993.	0.844
ABK71801.1	ABK76237.1	MSMEG_3762	MSMEG_5076	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter membrane-spanning protein.	0.858
ABK72999.1	ABK70221.1	MSMEG_3761	MSMEG_3765	Putative Clp protease subunit; Identified by match to protein family HMM PF02861.	Transcriptional regulator; Identified by match to protein family HMM PF00440.	0.557
ABK72999.1	ABK71801.1	MSMEG_3761	MSMEG_3762	Putative Clp protease subunit; Identified by match to protein family HMM PF02861.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.931
ABK72999.1	ABK74602.1	MSMEG_3761	MSMEG_3763	Putative Clp protease subunit; Identified by match to protein family HMM PF02861.	ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025.	0.568
ABK73366.1	ABK74109.1	MSMEG_3955	MSMEG_1642	Conserved hypothetical protein.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.	0.483

page 1 of 3

Server load: medium (44%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About