Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK69933.1Conserved hypothetical protein; Identified by match to protein family HMM PF03966; Belongs to the UPF0434 family. (69 aa)    
Predicted Functional Partners:
ABK76196.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.841
ABK73777.1
acyl-CoA synthase; Identified by match to protein family HMM PF00501.
 
    0.799
aftC
Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
  
     0.730
ABK70327.1
Conserved hypothetical protein.
  
    0.723
ABK71100.1
HIT family protein; Identified by match to protein family HMM PF01230.
  
    0.710
ABK74560.1
acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643.
  
     0.696
ABK75671.1
Probable conserved transmembrane protein.
 
     0.678
ABK75913.1
Putative membrane protein.
  
     0.655
ABK72375.1
Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602.
  
    0.634
ABK71134.1
Probable arabinosyltransferase B; Identified by match to protein family HMM PF04602.
  
    0.629
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.