Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK69818.1Conserved hypothetical protein. (413 aa)    
Predicted Functional Partners:
ABK76206.1
Soul heme-binding protein.
      
 0.824
ABK70342.1
IS1096, tnpA protein; Identified by similarity to GP:150005; match to protein family HMM PF01610.
      
 0.824
mce
methylmalonyl-CoA epimerase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081.
      
 0.801
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.782
ABK71478.1
LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
     
 0.777
ABK75617.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06738.
  
  
 0.660
ABK73987.1
Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
     
 0.565
ABK70115.1
Putative esterase.
       0.559
pknB
Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA.
       0.550
ABK73547.1
IS1096, tnpA protein; Identified by similarity to GP:150005; match to protein family HMM PF01610.
      
 0.550
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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