Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK73432.1Phosphotransferase enzyme family protein, putative; Identified by match to protein family HMM PF01636. (355 aa)    
Predicted Functional Partners:
ABK74378.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
     
 0.805
ABK70844.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
 
     0.787
ABK70546.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
   
 0.746
ABK73891.1
acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF00441.
 
 0.716
ABK73531.1
Conserved hypothetical protein.
 
   
 0.711
ABK74049.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
   
 0.701
ABK74316.1
Conserved hypothetical protein.
 
     0.698
ABK71957.1
Identified by match to protein family HMM PF04909.
  
    0.688
ABK74782.1
Identified by match to protein family HMM PF04909.
  
    0.662
ABK70468.1
Identified by match to protein family HMM PF04909.
  
    0.661
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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