Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK74930.114 kDa antigen; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. (145 aa)    
Predicted Functional Partners:
ABK75025.1
Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family.
  
  
0.952
ABK71314.1
Spore protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family.
  
  
 
0.949
ABK73042.1
Probable conserved transmembrane protein.
 
  
 0.764
ABK72096.1
Identified by match to protein family HMM PF00582.
  
  
 0.754
ABK71901.1
[NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175.
  
 
 0.752
ABK72965.1
Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
  
 0.746
ABK74175.1
Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494.
 
 
 0.742
ABK73021.1
[NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037.
  
    0.726
clpB
Chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
 
 
 0.703
ABK69913.1
[NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058.
  
    0.702
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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