Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK69703.1Aryl-alcohol dehydrogenase; Identified by match to protein family HMM PF00107. (379 aa)    
Predicted Functional Partners:
ABK70740.1
Vanillin dehydrogenase; Identified by match to protein family HMM PF00171.
  
 0.870
ABK71881.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
   
  
 0.831
ABK71907.1
Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672.
      
 0.824
ABK76209.1
methylmalonyl-CoA mutase, N-terminus of large subunit; Identified by match to protein family HMM PF01642; match to protein family HMM TIGR00641.
      
 0.824
ABK76208.1
Lsr2 protein.
      
 0.801
ABK73456.1
Amine oxidase [flavin-containing] B; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.
    
 0.746
ABK75946.1
Zinc-binding alcohol dehydrogenase family protein; Identified by match to protein family HMM PF00107; match to protein family HMM TIGR02822.
 
 
 0.734
ABK73293.1
Zinc-binding dehydrogenase; Identified by match to protein family HMM PF00107.
  
 
 0.712
mimA
Propane monooxygenase hydroxylase large subunit; Component of the propane 2-monooxygenase multicomponent enzyme system which is involved in the degradation of propane via the O2-dependent hydroxylation of propane. Also involved in the degradation of acetone via the O2-dependent hydroxylation of acetone. Also able to catalyze the oxidation of phenol, methylethylketone (2-butanone), 1-propanol and 2-propanol.
     
  0.710
ABK71223.1
L-idonate 5-dehydrogenase; Identified by match to protein family HMM PF00107.
  
 
 0.705
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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