Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK70493.1Hypothetical metabolite transport protein YaaU; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. (465 aa)    
Predicted Functional Partners:
ABK75332.1
butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
    
  0.776
ABK71450.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
       0.773
ABK74608.1
Putative transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
 
 0.734
ABK76203.1
Identified by match to protein family HMM PF02629.
     
 0.726
ABK73396.1
Peroxisomal trans-2-enoyl-CoA reductase; Identified by match to protein family HMM PF00106.
     
 0.721
ABK70763.1
Sugar transporter; Identified by match to protein family HMM PF00083.
 
     0.704
ABK72520.1
Major facilitator superfamily protein; Identified by match to protein family HMM PF07690.
  
     0.601
ABK76174.1
Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF07690.
  
     0.597
ABK70248.1
Putative permease of the major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
     0.583
ABK72240.1
D-galactonate transporter; Identified by match to protein family HMM PF07690.
  
     0.572
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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