Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73275.1Alkanal monooxygenase; Identified by match to protein family HMM PF00296. (356 aa)    
Predicted Functional Partners:
ssuD-4
Nitrilotriacetate monooxygenase component A.
 
  
 0.784
ABK73850.1
Oxidoreductase, aldo/keto reductase family protein; Identified by match to protein family HMM PF00248.
       0.782
ABK74629.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
    0.697
ABK76152.1
Putative monooxygenase.
 
  
 0.672
ssuD-5
Nitrilotriacetate monooxygenase component A.
 
  
 0.644
ABK73147.1
ABC-type transporter, substrate binding protein; Identified by match to protein family HMM PF00496.
 
     0.609
ABK74734.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF08028.
  
    0.579
ABK72524.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
    0.560
ABK72471.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
       0.552
ABK74009.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
       0.551
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.