Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK74734.1acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF08028. (409 aa)    
Predicted Functional Partners:
ABK76152.1
Putative monooxygenase.
 
  
 0.851
ssuD-5
Nitrilotriacetate monooxygenase component A.
 
  
 0.838
ABK74629.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
    
0.828
ABK72524.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
     
 0.789
ABK72471.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
    0.785
ABK74009.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
       0.773
ABK73147.1
ABC-type transporter, substrate binding protein; Identified by match to protein family HMM PF00496.
       0.768
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 0.762
ABK71554.1
Monooxygenase; Identified by match to protein family HMM PF00296.
 
  
 0.739
ABK75988.1
Monooxygenase, NtaA/SnaA/SoxA family protein.
 
  
 0.711
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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