Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75783.1Conserved hypothetical protein. (89 aa)    
Predicted Functional Partners:
ABK69526.1
LppL protein.
 
     0.908
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.861
ABK73349.1
Conserved hypothetical protein.
  
    0.766
ABK74248.1
Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
    0.728
ABK69690.1
Conserved hypothetical protein.
  
     0.720
ABK75960.1
Conserved hypothetical protein.
  
    0.683
ABK69890.1
Conserved hypothetical protein.
  
     0.671
ABK73620.1
Conserved hypothetical protein.
  
     0.664
ABK75235.1
Conserved hypothetical protein.
  
     0.658
ABK75441.1
Conserved hypothetical protein.
  
     0.653
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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