Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK72968.1Catalase. (371 aa)    
Predicted Functional Partners:
ABK75805.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; Identified by match to protein family HMM PF00082.
 
 
 0.766
ABK73937.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00196; match to protein family HMM PF07721.
 
     0.741
ABK74950.1
Conserved hypothetical protein.
 
    0.679
ABK73346.1
Peroxidase; Identified by match to protein family HMM PF03098.
 
     0.578
ABK72970.1
Conserved hypothetical protein.
 
 0.557
sodA
[Mn] superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.549
ABK74728.1
[Mn] superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.549
sodC
Copper/zinc superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.540
ABK70080.1
Acetyltransferase, gnat family protein, putative; Identified by match to protein family HMM PF00583.
  
     0.506
ABK69844.1
Conserved hypothetical protein.
  
 
 0.497
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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