Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70628.1Integral membrane protein. (178 aa)    
Predicted Functional Partners:
ABK76022.1
Integral membrane protein; Identified by match to protein family HMM PF01970.
 
 
 0.987
ABK72071.1
Identified by match to protein family HMM PF03401.
 
  
 0.987
ABK70240.1
Integral membrane protein; Identified by match to protein family HMM PF01970.
 
 
 0.927
ABK72172.1
Identified by match to protein family HMM PF00582.
 
    0.905
ABK69643.1
Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.
 
  
 0.903
ABK71321.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
  0.884
ABK70315.1
Two component system histidine kinase; Identified by match to protein family HMM PF02518.
 
     0.851
ABK71794.1
Transcriptional regulatory protein CitT; Identified by match to protein family HMM PF00072.
 
     0.785
ABK69915.1
Streptomycin 6-kinase (Streptidine kinase) (Streptomycin6-phosphotransferase) (APH(6)); Identified by match to protein family HMM PF04655.
  
     0.497
ABK69707.1
Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158.
 
     0.489
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.