Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK76005.1Conserved hypothetical protein. (205 aa)    
Predicted Functional Partners:
ABK71394.1
Conserved hypothetical protein.
  
     0.771
ABK72696.1
Conserved hypothetical protein.
  
     0.770
ABK69890.1
Conserved hypothetical protein.
 
    0.768
ABK71866.1
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
 
  
  0.765
ABK71039.1
Conserved hypothetical protein.
 
  
 0.757
ABK73545.1
Conserved hypothetical protein.
  
    0.757
ABK74693.1
Conserved hypothetical protein.
 
     0.756
ABK70804.1
Conserved hypothetical protein.
 
     0.754
ABK75690.1
Conserved hypothetical protein.
 
    0.745
ABK74248.1
Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.739
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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