STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70363.1Conserved hypothetical protein. (129 aa)    
Predicted Functional Partners:
octT
Conserved hypothetical protein; Sugar octanoyltransferase likely involved in the biosynthesis of mycobacterial methylglucose lipopolysaccharide (MGLP). Catalyzes the transfer of an octanoyl group from octanoyl-CoA to the C6 OH of the second glucose in diglucosylglycerate (DGG). DGG is the preferred acceptor, but to a lesser extent, GG (glucosylglycerate) can also be used as substrate. DGG and GG are the two earliest intermediates in MGLP biosynthesis; Belongs to the OctT acyltransferase family.
 
     0.780
ABK73048.1
Methyltransferase, UbiE/COQ5 family protein.
 
   
 0.779
ABK69952.1
Methyltransferase, UbiE/COQ5 family protein.
 
   
 0.779
ABK72142.1
Identified by match to protein family HMM PF00132.
  
     0.766
ABK74249.1
Conserved hypothetical protein.
  
     0.766
ABK72817.1
Identified by match to protein family HMM PF00132.
  
     0.766
ABK71455.1
Glycosyl hydrolase, family protein 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family.
  
    0.763
ABK72111.1
Conserved hypothetical protein; Probable S-adenosylmethionine-dependent methyltransferase required for the 6-O-methylation of the polysaccharide backbone of 6-O- methylglucosyl lipopolysaccharides (MGLP). Belongs to the methyltransferase superfamily.
  
   
 0.752
ABK75511.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04167.
  
     0.747
ABK70069.1
Conserved hypothetical protein.
  
     0.745
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.