STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73223.1Conserved hypothetical protein. (360 aa)    
Predicted Functional Partners:
ABK69962.1
Conserved hypothetical protein.
       0.782
ABK76032.1
Conserved hypothetical protein.
  
     0.661
ABK72544.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.657
ABK75658.1
Conserved hypothetical protein.
  
    0.646
ABK74621.1
Putative C4-dicarboxylate transporter.
  
     0.646
ABK73169.1
Probable conserved transmembrane protein rich in alanine.
  
    0.635
ABK75772.1
Conserved hypothetical protein.
  
     0.629
ABK71772.1
Conserved hypothetical protein.
  
     0.624
ABK76224.1
Conserved hypothetical protein.
  
     0.589
ABK73570.1
Conserved hypothetical protein.
  
     0.586
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.