Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75988.1Monooxygenase, NtaA/SnaA/SoxA family protein. (456 aa)    
Predicted Functional Partners:
ABK74612.1
acyl-CoA dehydrogenase-family protein; Identified by match to protein family HMM PF08028.
 
  
 0.906
ABK74224.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
    0.792
ABK71226.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
       0.781
ABK70693.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
       0.781
ABK73656.1
ABC transporter oligopeptide binding protein; Identified by match to protein family HMM PF00496.
       0.779
ssuD-3
Nitrilotriacetate monooxygenase component A.
  
     0.770
ABK74734.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF08028.
 
  
 0.711
ABK70934.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028.
 
  
 0.674
ABK73261.1
Pesticide degrading monooxygenase; Identified by match to protein family HMM PF08028.
 
  
 0.655
ABK74629.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
  
 0.637
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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