Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73764.1Conserved hypothetical protein. (179 aa)    
Predicted Functional Partners:
ABK69828.1
Oxidoreductase FAD-binding region; Identified by match to protein family HMM PF00175; match to protein family HMM PF00970.
  
    0.802
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
  
 0.794
ABK75136.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.784
ABK73167.1
Oxidoreductase, molybdopterin binding; Identified by match to protein family HMM PF00174.
       0.781
ABK71420.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.744
ABK74935.1
Conserved hypothetical protein.
  
     0.661
ABK76158.1
Regulator of polyketide synthase expression, putative; Identified by match to protein family HMM PF07905.
  
   
 0.615
ABK71572.1
ABC-transporter integral membrane protein; Identified by match to protein family HMM PF02405.
   
  
 0.559
ABK72957.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.559
ABK71946.1
Conserved hypothetical proline and threonine rich protein.
     
 0.547
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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