STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK71604.1Transcriptional regulator; Identified by match to protein family HMM PF00196; match to protein family HMM PF07719; match to protein family HMM PF07721. (759 aa)    
Predicted Functional Partners:
ABK70243.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
      
 0.824
ABK71167.1
acyl-CoA synthase; Identified by match to protein family HMM PF00501.
      
 0.673
ABK74658.1
Conserved hypothetical protein.
 
    0.597
phoU-2
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
      
 0.548
ABK73468.1
Putative regulatory protein; Identified by match to protein family HMM PF00196.
 
  
 0.544
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
      
 0.534
ABK71185.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.499
ABK70558.1
Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211.
 
     0.495
ABK76137.1
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
 
     0.484
ABK75594.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
   
 0.431
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (26%) [HD]