Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK71351.1Sodium:solute symporter; Identified by match to protein family HMM PF00474; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (495 aa)    
Predicted Functional Partners:
ABK74373.1
Acetolactate synthase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
 
  
 0.938
speB-4
Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family.
 
  
 0.861
ABK72213.1
Transmembrane transport protein; Identified by match to protein family HMM PF02133; Belongs to the purine-cytosine permease (2.A.39) family.
 
    0.834
ABK74604.1
Regulatory protein, AsnC/Lrp; Identified by match to protein family HMM PF01037.
 
   
 0.590
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.546
ABK75795.1
Two-component system sensor kinase; Identified by match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229.
  
 
 0.542
ABK69979.1
Proline dehydrogenase; Identified by match to protein family HMM PF01619.
  
  
 0.515
ABK71143.1
Two-component system sensor kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229.
  
 
 0.498
ABK74329.1
Transcriptional regulator; Identified by match to protein family HMM PF00989; match to protein family HMM TIGR00229.
   
 
 0.483
ABK70244.1
Conserved hypothetical protein.
   
 
 0.483
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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