Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
ABK75842.1Conserved hypothetical protein. (154 aa)    
Predicted Functional Partners:
uppS
Undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) in the cis configuration with (2Z,6E)-farnesyl diphosphate (Z-FPP or EZ-FPP) generating the 50 carbon product trans,polycis-decaprenyl diphosphate. When (2E,6E)-farnesyl diphosphate (E-FPP or EE-FPP) is used in vitro, both primary products decaprenyl diphosphate and heptaprenyl diphosphate are synthesized. It is probably due to the fact that M.smegmatis synthesizes both (2E,6E,10E)- geranylgeranyl diphosphate (EEE-GGPP) and (2E,6E,10Z)-geranylgeranyl diphosphate (EEZ-GGPP). Can als [...]
  
  
 0.969
ABK73645.1
Identified by match to protein family HMM PF00293.
     
 0.958
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
     
 0.932
ABK72671.1
Conserved hypothetical protein.
  
    0.777
ABK72891.1
Conserved hypothetical protein.
  
    0.771
ABK74693.1
Conserved hypothetical protein.
  
     0.765
ABK70706.1
Probable exported protein.
  
     0.764
ABK74778.1
Probable conserved transmembrane protein.
  
     0.758
ABK72868.1
Conserved hypothetical protein.
  
     0.758
ABK74620.1
Conserved hypothetical protein.
  
     0.755
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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