STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73774.1Conserved hypothetical protein. (176 aa)    
Predicted Functional Partners:
ABK71857.1
NrtC protein.
 
     0.956
ABK73549.1
Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409.
 
     0.951
ABK74289.1
Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528.
 
     0.880
ABK72010.1
Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005.
 
    0.857
ABK74920.1
TetR-type transcriptional regulator of sulfur metabolism; Identified by match to protein family HMM PF00440.
 
     0.714
ABK72069.1
Conserved hypothetical protein.
  
     0.657
ABK72581.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.477
ABK73554.1
Gp15 protein.
  
     0.474
ABK73417.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06259; Belongs to the WXG100 family.
  
     0.466
ABK70249.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
  
     0.464
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.