Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ssuD-6Nitrilotriacetate monooxygenase component A; Identified by match to protein family HMM PF00296. (434 aa)    
Predicted Functional Partners:
ABK71667.1
Monoxygenase.
 
    
0.825
ABK73605.1
NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358.
 
 0.591
ABK74034.1
GAF domain, putative; Identified by match to protein family HMM PF01590.
       0.541
ABK72495.1
Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728.
  
 
 0.486
ABK72349.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein.
  
 
 0.486
ABK71685.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 
 0.473
ABK71607.1
Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528.
  
 
 0.473
ABK74762.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528.
  
 
 0.473
ABK72768.1
ABC transporter component A.
 
 
 0.454
ABK70866.1
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.425
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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