Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75734.1Conserved hypothetical protein; Identified by similarity to GP:22294891; match to protein family HMM PF04168. (325 aa)    
Predicted Functional Partners:
ABK69622.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04169; match to protein family HMM PF04174.
    0.992
ABK75852.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01841.
 
  
 0.989
ABK75826.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04168; match to protein family HMM PF04169; match to protein family HMM PF04174.
 
    0.909
ABK74369.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01841.
 
  
 0.908
ABK71173.1
Transglutaminase domain protein; Identified by match to protein family HMM PF01841.
 
  
 0.861
ABK71701.1
Conserved hypothetical protein.
 
     0.613
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.535
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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