Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK76171.1Salicylate hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. (382 aa)    
Predicted Functional Partners:
ABK76062.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.
 
 0.720
ABK73254.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
  
 0.715
ABK73446.1
2,6-dihydroxypyridine hydroxylase; Identified by match to protein family HMM PF01494.
  
     0.678
ribBA
Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.662
ABK73982.1
Identified by match to protein family HMM PF03109.
  
 0.658
ABK70314.1
FMN oxidoreductase; Identified by match to protein family HMM PF01613.
 
  
 0.649
ABK74649.1
Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444.
  
 
 0.639
ABK75118.1
Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444.
  
 
 0.639
ABK74830.1
Nitrilotriacetate monooxygenase component B; Identified by match to protein family HMM PF01613.
 
  
 0.628
ABK70997.1
Identified by match to protein family HMM PF03109.
   
 0.608
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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