STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73137.1Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. (107 aa)    
Predicted Functional Partners:
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.744
ripA
Secreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity).
  
 
 0.690
ABK72323.1
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.
 
  
 0.607
ABK70509.1
ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025.
 
  
 0.553
ABK72469.1
Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435.
 
  
 0.512
ABK71565.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323.
  
     0.480
ABK74581.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07332.
  
    0.467
ABK71306.1
Conserved hypothetical protein.
  
 
 0.463
ABK71831.1
Conserved hypothetical protein.
  
 
 0.463
ABK72424.1
Conserved hypothetical protein.
  
 
 0.463
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.