STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70645.1Sugar ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. (272 aa)    
Predicted Functional Partners:
ABK75862.1
ABC transporter membrane protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.979
ABK74574.1
Sugar ABC transporter substrate-binding protein; Identified by match to protein family HMM PF00532.
 
 0.978
ABK72559.1
Xylose transport system permease protein XylH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.862
ABK74858.1
DNA-binding protein.
 
 0.817
ABK72331.1
D-xylose-binding periplasmic protein.
 
 
 0.817
ABK75313.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.810
ABK72466.1
Sugar kinase, ribokinase family protein; Identified by match to protein family HMM PF00294.
 
  
 0.804
ABK73086.1
Sugar ABC transporter substrate-binding protein; Identified by match to protein family HMM PF00532.
 
 0.799
ABK73092.1
Protein IolB; Identified by match to protein family HMM PF06845.
 
  
 0.761
ABK72609.1
Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532.
 
 0.748
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.