Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK72607.1Identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. (508 aa)    
Predicted Functional Partners:
ABK70179.1
Glycerol-3-phosphate acyltransferase; Identified by match to protein family HMM PF01553; Belongs to the GPAT/DAPAT family.
 
 
 0.993
ABK75217.1
Acyltransferase, ws/dgat/mgat subfamily protein; Identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; Belongs to the long-chain O-acyltransferase family.
 
 0.974
ABK71854.1
Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
  
 0.922
ABK71683.1
PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569.
  
 0.885
ABK71433.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03007.
 
 0.821
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.786
ABK75709.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.773
ABK75641.1
Identified by match to protein family HMM PF00614.
  
 0.765
ABK75684.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
    
 0.737
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
  
 0.722
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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