Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK69961.1Conserved hypothetical protein. (455 aa)    
Predicted Functional Partners:
ABK71167.1
acyl-CoA synthase; Identified by match to protein family HMM PF00501.
     
 0.741
ABK74799.1
Glycosyl transferase, group 2 family protein, putative; Identified by match to protein family HMM PF00535.
  
  
 0.731
pks5
Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis.
  
  
 0.605
ABK73350.1
Condensation domain protein; Identified by match to protein family HMM PF00668.
  
  
 0.603
ABK70957.1
Conserved hypothetical protein.
  
   
0.570
ABK76062.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.
  
 0.431
ABK74294.1
Putative cytochrome P450 144; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
  
 0.421
ABK70714.1
P450 heme-thiolate protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
  
 0.421
ABK73820.1
Cytochrome P450 FAS1; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
  
 0.421
ABK74247.1
Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
  
 0.421
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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