STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70546.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (220 aa)    
Predicted Functional Partners:
ABK73531.1
Conserved hypothetical protein.
  
     0.771
ABK75594.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.766
ABK71957.1
Identified by match to protein family HMM PF04909.
  
     0.765
ABK74782.1
Identified by match to protein family HMM PF04909.
  
     0.763
ABK70702.1
Conserved hypothetical protein.
  
     0.758
ABK72509.1
Conserved hypothetical protein.
  
     0.758
ABK73891.1
acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF00441.
 
     0.750
ABK72974.1
Conserved hypothetical protein.
  
     0.749
ABK73432.1
Phosphotransferase enzyme family protein, putative; Identified by match to protein family HMM PF01636.
  
   
 0.746
ABK70246.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
  
  
  0.738
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.