Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70764.1Identified by match to protein family HMM PF00557. (425 aa)    
Predicted Functional Partners:
ABK71564.1
Identified by match to protein family HMM PF04909.
 
    0.952
ABK74376.1
enoyl-CoA hydratase, putative; Identified by match to protein family HMM PF00378.
 
 
 
 0.927
ABK72042.1
Identified by match to protein family HMM PF00557.
 
   
0.905
ABK75693.1
Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
 
     0.902
ABK76020.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
 
 
 
 0.875
ABK74776.1
3-alpha-hydroxysteroid dehydrogenase.
 
 
 0.797
ABK74694.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
  
 0.779
ABK72161.1
Conserved domain protein.
 
     0.767
ABK70326.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
 
  
 0.715
ABK72320.1
Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
       0.691
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.