STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75490.1Conserved hypothetical protein. (192 aa)    
Predicted Functional Partners:
cysM
Cysteine synthase B; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136.
  
  
 0.931
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
  
 0.910
ABK75030.1
Endo-type 6-aminohexanoate oligomer hydrolase; Identified by match to protein family HMM PF03576.
  
  
 0.885
ABK73517.1
Identified by match to protein family HMM PF01398.
 
     0.836
ABK74179.1
Identified by match to protein family HMM PF01694.
 
   
 0.819
ABK74504.1
Identified by match to protein family HMM PF02597.
       0.792
ABK70804.1
Conserved hypothetical protein.
  
    0.762
ABK74778.1
Probable conserved transmembrane protein.
  
     0.761
ABK73961.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02569.
  
     0.759
ABK75690.1
Conserved hypothetical protein.
  
     0.754
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.