Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK69820.1Putative transcriptional regulator; Identified by match to protein family HMM PF00440. (201 aa)    
Predicted Functional Partners:
dapB-2
Dihydrodipicolinate reductase, N-terminus domain protein; Identified by match to protein family HMM PF01113.
  
     0.586
ABK75046.1
Conserved hypothetical protein.
  
     0.562
ABK70583.1
Conserved hypothetical protein.
  
     0.558
ABK70260.1
acyl-CoA synthase; Identified by match to protein family HMM PF00501.
     
 0.549
ABK73766.1
3-oxoacyl-ACP synthase III.
 
  
 0.539
ABK75049.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
  
  
  0.519
ABK72581.1
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.496
ABK70247.1
Conserved hypothetical protein.
  
     0.495
ABK71145.1
Fatty acid hydroxylase; Identified by match to protein family HMM PF04116.
  
     0.445
ABK70046.1
Conserved hypothetical protein.
  
     0.440
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.