STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72980.1Identified by match to protein family HMM PF01243. (224 aa)    
Predicted Functional Partners:
ABK72204.1
Putative pterin-4-alpha-carbinolamine dehydratase; Identified by match to protein family HMM PF01329.
   
  
 0.828
ABK73938.1
Isochorismatase hydrolase; Identified by match to protein family HMM PF00857.
 
     0.810
ABK70439.1
Cytosine deaminase; Identified by match to protein family HMM PF00383.
      
 0.769
ABK71422.1
Rrf2 family protein (putative transcriptional regulator); Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738.
       0.647
ABK73225.1
3'(2'),5'-bisphosphate nucleotidase, putative; Identified by similarity to SP:P22255; match to protein family HMM PF00459.
  
    0.646
cysD
Sulfate adenylyltransferase, small subunit; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039.
  
    0.637
cysNC
Sulfate adenylytransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
       0.623
ABK73731.1
Amino-acid acetyltransferase; Identified by match to protein family HMM PF00583.
      0.541
ABK74165.1
Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF07690.
       0.432
ABK72791.1
Phosphotransferase enzyme family protein, putative; Identified by match to protein family HMM PF01636.
       0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.