STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73824.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (187 aa)    
Predicted Functional Partners:
ABK71930.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.772
ABK70399.1
Identified by match to protein family HMM PF00440.
  
     0.732
ABK72791.1
Phosphotransferase enzyme family protein, putative; Identified by match to protein family HMM PF01636.
  
  
 0.602
ABK73274.1
Conserved hypothetical protein.
     
 0.595
ABK69996.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369.
     
 0.590
ABK74165.1
Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF07690.
       0.524
ABK75106.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
 
 0.429
ABK75623.1
Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.411
ABK74585.1
Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
 
 0.409
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.