Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ABK69843.1Integral membrane protein; Identified by match to protein family HMM PF02366. (623 aa)    
Predicted Functional Partners:
ABK76211.1
Glycosyl transferase; Identified by match to protein family HMM PF00535; match to protein family HMM PF04138.
 
 
 0.954
ABK72371.1
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 
  
 0.743
ABK72654.1
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
  
 0.678
ABK71228.1
Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366.
 
    
0.649
ABK73170.1
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.533
ABK74393.1
Carbonic anhydrase; Identified by match to protein family HMM PF00484.
       0.510
ABK71149.1
Probable conserved integral membrane protein; Responsible for the addition of alpha-(1-2) mannose branches to the linear mannan core on the biosynthetic pathway to mature Lipoarabinomannan (LAM).
  
 
 0.495
ABK73804.1
Secreted protein, putative; Identified by match to protein family HMM PF01522.
  
 
 0.483
ABK75501.1
Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
  
 
 0.483
ABK75757.1
Identified by match to protein family HMM PF01522.
  
 
 0.483
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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