ABK75618.1 protein (Mycolicibacterium smegmatis)

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Score

ABK75618.1

DNA repair exonuclease; Identified by match to protein family HMM PF00149. (384 aa)

Predicted Functional Partners:

ABK73081.1

0.992

polA

0.980

ABK70161.1

0.966

ABK71856.1

0.964

recA

0.886

ABK72031.1

0.872

ABK72131.1

0.859

recQ

0.836

ABK70942.1

0.836

ABK73907.1

0.836

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70161.1	ABK75618.1	MSMEG_5002	MSMEG_5004	Conserved hypothetical protein.	DNA repair exonuclease; Identified by match to protein family HMM PF00149.	0.966
ABK70942.1	ABK71856.1	MSMEG_5399	MSMEG_1952	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	0.528
ABK70942.1	ABK72031.1	MSMEG_5399	MSMEG_3883	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739.	0.755
ABK70942.1	ABK72131.1	MSMEG_5399	MSMEG_4912	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	Putative helicase.	0.682
ABK70942.1	ABK73081.1	MSMEG_5399	MSMEG_5518	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	Antigen 34 kDa.	0.848
ABK70942.1	ABK73907.1	MSMEG_5399	MSMEG_5935	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614.	0.784
ABK70942.1	ABK75618.1	MSMEG_5399	MSMEG_5004	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	DNA repair exonuclease; Identified by match to protein family HMM PF00149.	0.836
ABK70942.1	polA	MSMEG_5399	MSMEG_3839	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.905
ABK70942.1	recA	MSMEG_5399	MSMEG_2723	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	Protein RecA; Required for homologous recombination (HR) and the bypass of mutagenic DNA lesions (double strand breaks, DSB) by the SOS response. Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. Numerous X-ray crystals have been resolved under different conditions which indicate the flexibility of the protein, essential to its function. Gln-196 contributes to this plasticity by acting as a switch residue, which transmits the ef [...]	0.841
ABK70942.1	recQ	MSMEG_5399	MSMEG_5397	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00271.	0.991
ABK71856.1	ABK70942.1	MSMEG_1952	MSMEG_5399	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	0.528
ABK71856.1	ABK72031.1	MSMEG_1952	MSMEG_3883	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739.	0.954
ABK71856.1	ABK72131.1	MSMEG_1952	MSMEG_4912	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	Putative helicase.	0.907
ABK71856.1	ABK73081.1	MSMEG_1952	MSMEG_5518	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	Antigen 34 kDa.	0.967
ABK71856.1	ABK73907.1	MSMEG_1952	MSMEG_5935	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614.	0.528
ABK71856.1	ABK75618.1	MSMEG_1952	MSMEG_5004	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	DNA repair exonuclease; Identified by match to protein family HMM PF00149.	0.964
ABK71856.1	polA	MSMEG_1952	MSMEG_3839	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.993
ABK71856.1	recA	MSMEG_1952	MSMEG_2723	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	Protein RecA; Required for homologous recombination (HR) and the bypass of mutagenic DNA lesions (double strand breaks, DSB) by the SOS response. Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. Numerous X-ray crystals have been resolved under different conditions which indicate the flexibility of the protein, essential to its function. Gln-196 contributes to this plasticity by acting as a switch residue, which transmits the ef [...]	0.980
ABK71856.1	recQ	MSMEG_1952	MSMEG_5397	ATP-dependent DNA helicase; Identified by match to protein family HMM PF00570; match to protein family HMM PF00580.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00271.	0.770
ABK72031.1	ABK70942.1	MSMEG_3883	MSMEG_5399	5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270.	0.755